AlignQualityStoreElement - SeqAn API Documentation

# Class AlignQualityStoreElement
Stores the alignment qualities.

Defined in | <seqan/store.h>
Signature | `template <typename TScore[, typename TSpec]> struct AlignQualityStoreElement;`

## Template Parameters

`TScore` | Type to store align and pair score values.
`TSpec` | The specializing type. Default: `void`.

## Member Function Overview

- `AlignQualityStoreElement::AlignQualityStoreElement();`
  Constructor, sets all members to 0.

## Member Variable Overview

- `TCount AlignQualityStoreElement::errors`
  Absolute number of errors in the alignment (`unsigned char`).
- `TScore AlignQualityStoreElement::pairScore`
  Combined score of both alignmetns and pair match.
- `TScore AlignQualityStoreElement::score`
  Score of the alignment.

## Detailed Description

Value type of alignQualityStore string.

## Member Functions Detail

### `AlignQualityStoreElement::AlignQualityStoreElement();`

Constructor, sets all members to 0.

#### Data Races

If not stated otherwise, concurrent invocation is not guaranteed to be thread-safe.

## Member Variables Detail

### `TCount AlignQualityStoreElement::errors`

Absolute number of errors in the alignment (`unsigned char`).

### `TScore AlignQualityStoreElement::pairScore`

Combined score of both alignmetns and pair match.

### `TScore AlignQualityStoreElement::score`

Score of the alignment.

#### Dox Sources

    /*!
     * @class AlignQualityStoreElement
     *
     * @headerfile <seqan/store.h>
     *
     * @brief Stores the alignment qualities.
     *
     * @signature template <typename TScore[, typename TSpec]> struct
     *            AlignQualityStoreElement;
     *
     * @tparam TScore Type to store align and pair score values.
     * @tparam TSpec The specializing type. Default: <tt>void</tt>.
     *
     * Value type of @link FragmentStore::alignQualityStore @endlink string.
     *
     * @fn AlignQualityStoreElement::AlignQualityStoreElement
     *
     * @brief Constructor, sets all members to 0.
     *
     * @signature AlignQualityStoreElement::AlignQualityStoreElement();
     *
     * @var TScore AlignQualityStoreElement::pairScore;
     *
     * @brief Combined score of both alignmetns and pair match.
     *
     * @var TScore AlignQualityStoreElement::score;
     *
     * @brief Score of the alignment.
     *
     * @var TCount AlignQualityStoreElement::errors;
     *
     * @brief Absolute number of errors in the alignment (<tt>unsigned char</tt>).
     */